Promoter predictions

Promoter predictions for 82 eukaryotic sequences with score cutoff 0.80 (transcription start shown in larger font):

Promoter predictions for CY01 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY03 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY04 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY05 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY07win :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CY07win :

Start   End    Score               Promoter Sequence
  220   170    0.95    GACTGGCTCAATAATTAAAGGGCAGGAAAAGGCTGCAGTCAAGTCCAGAT

Promoter predictions for CY09 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY10 :

Start   End    Score                Promoter Sequence
  136   186    0.97    TCTTGTATAAAATACTAAAATGAGCCAGCACAAAGTACACAGAAATATAT
  166   216    0.84    CAAAGTACACAGAAATATATCCCCGGCACAAAGATGAATCACTAGTGAAT

Promoter predictions for CY11 :

Start   End    Score                Promoter Sequence
   92   142    0.89    GAGGAGTCTGAAAAAAGGAAGCAGTTAACTGAAGGTCCCCAATATCGGCA

Promoter predictions for CY14 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CY14 :

Start   End    Score               Promoter Sequence
  197   147    0.89    GAGGAGTCTGAAAAAAGGAAGCAGTTAACTGAAGGTCCCCAATATCGGCA

Promoter predictions for CY15 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CY15 :

Start   End    Score               Promoter Sequence
  186   136    0.97    CACTAGTGATTAAAAGATGCGCACAGTGTCACACAGCGAAATGCAGATTA

Promoter predictions for CY17 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CY17 :

Start   End    Score               Promoter Sequence
  192   142    0.88    CACTAGTGATTAAAAAGTGTTCCCAGTGTCATACTCACTGTATCCTTTGT

Promoter predictions for CY49 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY50 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY51 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY52 :

Start   End    Score                Promoter Sequence
   51   101    0.88    CATCAAGCTCTCTATAACCACCAGCATCAGGTGCCATACCGACGGACATT

Predictions for the reverse strand of CY52 :

Start   End    Score               Promoter Sequence
  253   203    0.99    TGTATTTGGTTAAAAGAGGGTCCCTTAGCAAGCTATAGAGGTAAATTGGA
  131    81    0.94    AGATATAAATATATAGACCTTCATACTCTGTAATGTCCGTCGGTATGGCA

Promoter predictions for CY56 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY57win :

Start   End    Score                Promoter Sequence

Promoter predictions for CY58 :

Start   End    Score                Promoter Sequence

Promoter predictions for CY59win :

Start   End    Score                Promoter Sequence
  102   152    0.95    GACTGGCTCAATAATTAAAGGGCAGGAAAAGGCTGCAGTCAAGTCCAGAT

Promoter predictions for CY60 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS29 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS30 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS31 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS40 :

Start   End    Score                Promoter Sequence
   25    75    0.82    GGGCGGTGTGTATGTAGTGGGGAGGCTGGGGAGTGTCTGTCTGGGCGGTG

Promoter predictions for CS42 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS43 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS44 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS62 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS63win :

Start   End    Score                Promoter Sequence
  242   292    0.99    AAGATGGAGGTATATAGGCTGGGCAAGAGGTGGTGAGGTAAATTGGGGTT
  314   364    0.95    TTTAGAGGGATATAAAGCACTGCCAAGTCCTTTGAGTTTTAAGCTGTTGC

Predictions for the reverse strand of CS63win :

Start   End    Score               Promoter Sequence
  268   218    0.90    CTTGCCCAGCCTATATACCTCCATCTTCAGCAAACCCTGGAAAGGCCACA

Promoter predictions for CS64 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS67 :

Start   End    Score                Promoter Sequence
  267   317    0.96    ATGGTGGGCTATAAAATAGTGCACCTTGTCCATGTGGTGTATAGTGGGGT

Promoter predictions for CS68win :

Start   End    Score                Promoter Sequence
  101   151    0.86    AGTTTTTATTTAAAAAACTACAGGAGAAGAAGTTTCATTATAACTCGCCT

Predictions for the reverse strand of CS68win :

Start   End    Score               Promoter Sequence
  377   327    0.84    TAAAATATATATTAAAAAGCACTAATACTCCTTTTAGTACAAACTTAAAG
  204   154    0.97    AAATCTTTTTCTAAATAAAATGACAGATCATGGTGCAGCCAACATAAAGG
   61    11    0.94    AGAAATGAATTTATAAAATTCAGTGTACACACCGCCCGTCACCCTCTGCA

Promoter predictions for CS69 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS73 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS74 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS75 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS76 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS79 :

Start   End    Score                Promoter Sequence
   51   101    0.99    AGGTGCACTATTTTAAAGCCCACCATACACCACATGGACCAGGTGCACTA

Predictions for the reverse strand of CS79 :

Start   End    Score               Promoter Sequence
   76    26    0.99    ATGGTGGGCTTTAAAATAGTGCACCTTGTCCATGTGGTGTATAGTGGGGT

Promoter predictions for CS82 :

Start   End    Score                Promoter Sequence
  122   172    0.93    GTGGGTTGTGTATATACACGACTTGATGATATTTTTCATTTAACAGAGGA

Predictions for the reverse strand of CS82 :

Start   End    Score               Promoter Sequence
  145    95    1.00    AAGTCGTGTATATACACAACCCACGCACGTACACACACCCACGCACGTAC

Promoter predictions for CS84 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS87 :

Start   End    Score                Promoter Sequence

Promoter predictions for CS89 :

Start   End    Score                Promoter Sequence
  241   291    0.93    ATTTCTTCAATATATACACACGCCATACAGACAGATATAAGCTGCACCCA

Predictions for the reverse strand of CS89 :

Start   End    Score               Promoter Sequence
  418   368    1.00    GCGGTGTGTGTAAATATTAGCGCGGATTTAGCGTGTGGTGTTAAGTTCCA
  267   217    0.92    TATGGCGTGTGTATATATTGAAGAAATGCTATAGCCGTTCACCGATATTC
  176   126    0.99    AGTTTACTAAATAAAACAGGGCACAATGTCGTCGTATTTCACTTGGGTAA

Promoter predictions for CS95 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB01 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB04 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB09 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB11 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB16 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB18 :

Start   End    Score                Promoter Sequence
  125   175    0.92    ACCTGGCACCTAAAAATTGCTAGCTGAAGTCGGATGTGACTGGCCGAAAG

Promoter predictions for CB20 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB23 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CB23 :

Start   End    Score               Promoter Sequence
  145    95    0.85    GGGTCATTTCAATAAATCGGTGCCAGTTGATGCAGCTTTGGGGGTCATTT

Promoter predictions for CB28 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CB28 :

Start   End    Score               Promoter Sequence
  145    95    0.85    GGGTCATTTCAATAAATCGGTGCCAGTTGATGCAGCTTTGGGGGTCATTT

Promoter predictions for CB34 :

Start   End    Score                Promoter Sequence
  125   175    0.92    ACCTGGCACCTAAAAATTGCTAGCTGAAGTCGGATGTGACTGGCCGAAAG

Promoter predictions for CB35 :

Start   End    Score                Promoter Sequence
  125   175    0.92    ACCTGGCACCTAAAAATTGCTAGCTGAAGTCGGATGTGACTGGCCGAAAG

Promoter predictions for CB37 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB39 :

Start   End    Score                Promoter Sequence

Promoter predictions for CB40 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CB40 :

Start   End    Score               Promoter Sequence
   63    13    0.87    GGGTCATTTCAATAAATCGGTGCCAGTTGATGCAGCTTTGGGTGCTAATG

Promoter predictions for CB44 :

Start   End    Score                Promoter Sequence
  125   175    0.92    ACCTGGCACCTAAAAATTGCTAGCTGAAGTCGGATGTGACTGGCCGAAAG

Promoter predictions for CB45 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of CB45 :

Start   End    Score               Promoter Sequence
  145    95    0.85    GGGTCATTTCAATAAATCGGTGCCAGTTGATGCAGCTTTGGGGGTCATTT

Promoter predictions for DOP01 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP03 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP04 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP06 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of DOP06 :

Start   End    Score               Promoter Sequence
   57     7    0.82    CAAGGCGACGCTAAAAATCAACGACCACATCATCCCCTCGAGTCGGAATC

Promoter predictions for DOP07 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP08R :

Start   End    Score                Promoter Sequence
  465   515    1.00    AGTGAGTCGATAAAAAAGGCCGAAAAAAGCTTACAATCAGCGCTCTCCAA

Predictions for the reverse strand of DOP08R :

Start   End    Score               Promoter Sequence
  557   507    0.85    TCCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCCTCCAGCTTGGAGA

Promoter predictions for DOP10 :

Start   End    Score                Promoter Sequence
  366   416    0.98    CCAAGATTTTTAAAAAATCCACATTGATTGATCTGCTTCCAAATTGCACA
  416   466    0.93    TGGTGGGATTATATCTCAGCCCCGTTGGGTTCACGAAGCCACATCCCAAG

Predictions for the reverse strand of DOP10 :

Start   End    Score               Promoter Sequence
   84    34    0.87    TCTTCCTCAATTTAAAGGTTCCTGTGGCTGACCCAGCCTCACCTATGCCA

Promoter predictions for DOP14R :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP16 :

Start   End    Score                Promoter Sequence
  256   306    0.82    CCAAACATTCTAAAAATGAACTCCAGCCAAACAAGGTTTCTGAGAAGAGC

Promoter predictions for DOP17 :

Start   End    Score                Promoter Sequence

Predictions for the reverse strand of DOP17 :

Start   End    Score               Promoter Sequence
   88    38    0.86    GCTAGTTTTCTAAATAGGCACTGCCGTTGGCTAGCTTTCTGCACTGCTTT

Promoter predictions for DOP19 :

Start   End    Score                Promoter Sequence
   53   103    0.94    TGAAAGGCTGTATAGAGACGCTGGGAGCCTTGAACGGACTGCTACCTTCA

Promoter predictions for DOP20T :

Start   End    Score                Promoter Sequence
  466   516    0.85    GGAGTGGGTCGATAGAAACGGCCGAAGAAAGTGTGCAATTAGCGCTCGCC

Predictions for the reverse strand of DOP20T :

Start   End    Score               Promoter Sequence
  560   510    0.80    TCCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCTTCCAGCTTGGCGA

Promoter predictions for DOP20S :

Start   End    Score                Promoter Sequence
  107   157    0.80    TCCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCTTCCAGCTTGGCGA

Predictions for the reverse strand of DOP20S :

Start   End    Score               Promoter Sequence
  201   151    0.85    GGAGTGGGTCGATAGAAACGGCCGAAGAAAGTGTGCAATTAGCGCTCGCC

Promoter predictions for DOP21 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP23R :

Start   End    Score                Promoter Sequence
  107   157    0.80    TTCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCTTCCAGCTTGGCGA

Predictions for the reverse strand of DOP23R :

Start   End    Score               Promoter Sequence
  201   151    0.85    GGAGTGGGTCGATAGAAACGGCCGAAGAAAGTGTGCAATTAGCGCTCGCC

Promoter predictions for DOP27 :

Start   End    Score                Promoter Sequence
  200   250    0.98    TATTCAAGCATAAAACAGCCCCCGGCCACATTGCTCCCTCGAGTCGGAAT

Promoter predictions for DOP31R :

Start   End    Score                Promoter Sequence
  107   157    0.80    TTCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCTTCCAGCTTGGCGA

Promoter predictions for DOP34 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP37 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP38R :

Start   End    Score                Promoter Sequence
  107   157    0.86    TCCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCCTCCAGCTTGGCGA

Promoter predictions for DOP43 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP46 :

Start   End    Score                Promoter Sequence

Promoter predictions for DOP47R :

Start   End    Score                Promoter Sequence
  107   157    0.80    TCCATTGATTTTTAAGAGCCACTGCTTCGTCCAGTCTTCCAGCTTGGCGA

Predictions for the reverse strand of DOP47R :

Start   End    Score               Promoter Sequence
  201   151    0.82    GGAGTGGGTCGATAGAAACGGCCGAACAAAGTGTGCAATTAGCGCTCGCC